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Data transfer and configuration overview
MinIT basecalls data from the MinION Mk 1B, via integrated Guppy in MinKNOW. .fast5 and FASTQ files are output and stored locally on the MinIT in the Data folder.
This folder and the output files can be accessed through the steps below.
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Within the 'data' folder, a MinKNOW icon with the title 'MinKNOW' can be found – double-click on this to open the MinKNOW interface.
The icon named 'MinKNOW' will guide the user to MinKNOW, the sequencing software.
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Load MinKNOW using the guide in 'MinKNOW on MinIT - Windows'
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Once the MinIT 'Data' folder have been located at the MinIT network address, the 'Data' folder to locate the 'Basecalled' folder. The 'Basecalled' folder will contain a folder with the name of your experiment.
The folder named after your experiment can be found in the 'Basecalled' folder. -
This folder can be copied to one of your drives on the device connected to your MinIT for further analysis.
Relevant file output folders labelled .fast5 and FastQ will be within these. Access these for your data.