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Nanopore Learning / Lesson library /
Running a Guppy basecalling script

In this video you will learn how to us the standalone version of Guppy to basecall nanopore sequencing data offline from the command line.

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Learning objectives
  • Learn about the parameters required to run a basecalling script with Guppy
  • Understand the differences in Guppy performance depending on CPU and GPU specifications
  • Get familiar with the optional guppy_basecaller parameters and how to acquire further information
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