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SARS-CoV-2: ARTIC workflow data and analysis files

In this video we will introduce and discuss the main file types and file formats for the data files that are required and generated by the ARTIC Field Bioinformatics analysis workflow. This will explain the FASTQ, BAM, VCF and FASTA format files.

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Learning objectives
  • Learn about the required input files for the ARTIC analysis workflow
  • Learn about the results generated from the ARTIC analysis workflow
  • Understand the format and structure of files related to the ARTIC analysis workflow
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