Open the EPI2ME report
You can see further information about your run using EPI2ME. Once MinKNOW has aquired and basecalled the runs, they will be picked up by EPI2ME and sent down the chosen workflow.
For this experiment, we have already chosen the 'FASTQ RNA Control Experiment' workflow. This will take the basecalled reads and align them to the reference yeast enolase 2 gene. You can use the report to confirm that you have produced a successful library and examine some basic genomic statistics such as depth and distribution of coverage, accuracy, etc.
Click View Report in the EPI2ME Agent window
If necessary, you may need to click Accept cookies.
The EPI2ME report will appear in a new browser window.
You can see your attributes (e.g. "RNA_control") have appeared at the top.
Click the 'RNA alignment' tab, which will show you your reads as they appear, and map them to the enolase 2 gene.
As your base-called reads arrive from MinKNOW, they will enter the EPI2ME workflow immediately.
However, since they can take some time to pass through the workflow, there may be a slight delay before they appear on the report.